Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825928.1_cds_XP_016502494.1_16130
CDS Infomation

[gene=LOC107820685] [db_xref=GeneID:107820685] [protein=pentatricopeptide repeat-containing protein At2g36730-like] [protein_id=XP_016502494.1] [location=complement(9972..11354)] [gbkey=CDS]
Sequence

ATGAGCTTCACCTCCAAAACCCAACAACTCTTGGCTCTTCTCAACTCTTGTTCTTCTCTT
AAACACCTCTTCCAAATCCATACTCACATCATAATCTCCGGACTCTGTCAACAAACTTCT
ATCATCCTTAAAATCGTCAACTTTTTTGCATCTCATACCCCTATAAACTCAGCTACTTAC
GTGGGTCTTGTCATCAAACAATCCCACAACTCATCTAATGTGTGGTGGAATATCCTCATT
AGAAATTATGCCACGTGCAACAACTGTTCACATAGTGAAGCCATTCGTGTTTTTGTCGAA
ATGCGGCGGTGTGGAGCTGCTTCAGATGAATTCACATACCCTTTTCTATTCAAAGCTTGT
TCGTCCTTTTTGGGTCTGAAAGAAGGGAAACAGATTCATGCTGAAGCAATCAAGATCGGT
TTTTGTAACAACGTTTATGTTCAGAACACTTTGGTTCATTTTTATGGATCTTGCAAGAAG
ATTGTGGATGCATATAAGGTGTTTGTTGTTATGTCGCTGAGAACTGTTATTTCTTGGAAT
TCTACGATTTCGGCTTTTGTAGAAAGTTGTTGGTTTTACGAAGCGGTTGAGATTTTTCGT
GAGATGAGAGAATGTCAGTTCCAACCGGATGAGACAACTATGGTTGTTTTGCTCTCTGCT
TGTGCTGAGTTGGGTGACTTGAGTTTAGGTAAATGGATACACTGTCAAGTGATTGAGCAA
GGGATGTTTGTGAATTGTCAATTGGGAACTTCCCTTGTTGATATGTATGCTAAATGTGGA
GCAGTAGATTATGCTCGTTTGATCTTTGATAGGATTGGTGAAAGAAATGTGTGGACATGG
AGTGCGATGATTCTTGGATTAGCACGGCATGGATTTGCAGTAGAGGCCATGGAACTCTTT
AGGAAAATGAAGGATTGCTCTATGAAGCCTAACTATGTGACCTTTCTAGGTGTGCTTTGC
GCTTGTAGTCATGTTGGTATGGTAGAAGAGGGGCAACGTTTGTTTCGAGAGATGGAAAGT
GTCCATAGGATCAAACCTATGATGGCACATTATGGTGCCATGGTAGATATCTTGAGTCGT
GTTGGTCGTCTTGAAGAAGCGTACAAATTCATTGCGGACATGCCTGTTGAGGCTGATGCA
GTTATATGGAGGACACTACTGAGTTCTTGCCACATTCATGATATTAATGACTATACTGGA
GTTGGAGAGAAGGTCAGAAGGAGGTTGCTTGCATTGGAGCCTAAAAGGAGTGGGAATTTA
GTTATGGTAGCAAACAAGTATGCTGAAGTTGGATTATGGGAGAAAGCAGCAAAATTGAGA
AGAGGTATGAGGGTCAGACGACTTAAGAAGGTGGCTGGAGAAAGTTGCGCGTCAATCTTC
TAG

Peptide Sequence

PEP ID

XP_016502494.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g36730-like [Nicotiana tabacum]
Sequence

MSFTSKTQQLLALLNSCSSLKHLFQIHTHIIISGLCQQTSIILKIVNFFASHTPINSATY
VGLVIKQSHNSSNVWWNILIRNYATCNNCSHSEAIRVFVEMRRCGAASDEFTYPFLFKAC
SSFLGLKEGKQIHAEAIKIGFCNNVYVQNTLVHFYGSCKKIVDAYKVFVVMSLRTVISWN
STISAFVESCWFYEAVEIFREMRECQFQPDETTMVVLLSACAELGDLSLGKWIHCQVIEQ
GMFVNCQLGTSLVDMYAKCGAVDYARLIFDRIGERNVWTWSAMILGLARHGFAVEAMELF
RKMKDCSMKPNYVTFLGVLCACSHVGMVEEGQRLFREMESVHRIKPMMAHYGAMVDILSR
VGRLEEAYKFIADMPVEADAVIWRTLLSSCHIHDINDYTGVGEKVRRRLLALEPKRSGNL
VMVANKYAEVGLWEKAAKLRRGMRVRRLKKVAGESCASIF

Transcript Sequence

Gene sequence data has not been registered.